We are pleased to announce the release of FuncNet 1.1, which provides a new score retrieval operation — RetrieveCompleteScores.
This supplies the overall Fisher’s Method score for each protein pair, as with RetrievePairwiseScores, but also gives you the scores from each predictor from which the overall scores were calculated. This enables service consumers to integrate FuncNet results with their own analysis methods at a finer level of granularity, and allows for filtering of predictors, score integration using alternative methods, etc.
When interpreting the results, remember that only the p-value for each prediction is comparable between predictors. The raw scores scales and distributions vary between predictors, and are provided for informational purposes only, and for complete transparency in case you want to train a classifier on them for example. Remember too that not all predictors actually yield a single raw score, in which case this field will be set to zero.
See the example queries page for more details on this query.
